The 2023 animated movie “Elemental” imagines a world of anthropomorphized elements: earth, water, air and fire. References to chemistry are woven into the plot. There is an Alkali Theater; Mineral Lake, which displays different colors when exposed to flame; and the Wetro mass transit system whose timetable is based on the periodic table of elements.

In the non-cinematic world, there can also be a bit of drama when chemicals come together. Researchers laid out the action in “Microbially-Mediated Aerobic Oxidation of Trace Element-Bearing Pyrite in Neutral PH-Sandstone Aquifer Sediments,” https://doi.org/10.1039/D3VA00399J. It appeared in the April 12 issue of “Environmental Science: Advances,” published by the Royal Society for Chemistry.

The “setting” was Trempealeau County in west-central Wisconsin.

The “action” revolved around the region’s pyrite-bearing geological strata of an aquifer that was exposed to oxygen as a result of human activities or through natural processes such as groundwater fluctuation or a fissure in overlaying rock and soil. The research team—the cast, if you will—demonstrated the ability of aerobic microbial metabolism to promote oxidation of pyrite in this instance of now-exposed circumneutral-pH sandstone. The process results in the release of naturally occurring contaminants iron, manganese, aluminum, cadmium, chromium, cobalt, copper, nickel and vanadium into the groundwater at a scale of months to years. Contaminants, of course, could then contaminate drinking water for residents in the area of these microbially affected aquifers.

Closeup of person standing in front of evergreen trees.
Eric Roden was part of study with recently published results. It offers details on how microbes can accelerate the oxidization of pyrite, which in turn releases naturally occurring contaminants into groundwater. UW-Madison photo.

The “cast” of this research drama included Eric Roden, a geomicrobiologist scientist at the University of Wisconsin-Madison. He said the oxidation, “Would happen with or without microbial activity, but the key aspect of  Lisa’s work is that microbes get energy from the pyrite and they accelerate the reaction.”

The Lisa he referred to is Lisa Haas, another critically important cast member. She is the paper’s lead author and now a geoscientist at the Wisconsin Geological and Natural History Survey. As a graduate student on this research team, she conducted experiments with oxidized Wonnewoc Formation and Tunnel City Group geologic material. Haas infused the material in unfiltered groundwater that included the native aquifer microorganisms.

The work was funded in 2019 by the University of Wisconsin Water Resources Institute (“Microbially Mediated Oxidation of Trace Element-Bearing Sulfide Minerals in Sandstones of Trempealeau County, Wisconsin”. In 2020, Haas said, “What we did is collect groundwater with some of those native microorganisms, and I put them in a vial and monitored chemical compounds that are produced as a result of this mineral dissolving and found that, with the native microbial communities, pyrite will dissolve faster than [it does] abiotically.”

Person wearing hard hat standing in sandy area digging with a shovel.
Researcher Lisa Haas collecting a sample in west-central Wisconsin. Contributed photo.

Haas further investigated pyrite oxidation in Tunnel City Group overburden (that is, the formation laying on top of the more desirable Wonnewoc Formation material if you are seeking sand for frac-sand mining operations) and unprocessed sand from the Wonnewoc material. This work explored what it means if, “the sand that is not used contains pyrite and you throw that in a pond or in a pile and it rains and the water seeps down through that pile into a pond and the pyrite gets oxidized, now you’ve got frac sand ponds and then acidic metal-rich groundwater could leach down into the groundwater,” said Roden.

The implications of these oxidation-jump-starting microbes for homeowners or public water system managers are, “If there was (water) pumping—anywhere in the state—and that pumping led to input of oxygen-containing fluid to previously reduced (previously reduced means it hasn’t already been exposed to oxygen) pyrite-rich aquifers, then we’ve got a—problem,” Roden said. “If there’s frac sand mining, you can pull out pyrite-containing material that’s not used and expose that to rain depending on the nature of the solid phase geochemistry of the formation and the rates of fluid, you could again have a problem.”

This recently published work built on two previous paths of study:

UW-Madison Ph.D. students Elizabeth Percak-Dennett and Stephanie Napieralski were the first group to show that at neutral PH microbes can accelerate pyrite oxidization. Roden said, “At the very beginning, before it goes acidic and that whole set of interactions that is so well known in acid mine drainage and biomining everything else before that happens before it goes acidic, other kinds of microbes accelerate the initial oxidization process.”

As a student, Haas had also worked with others, including study lead Jay Zambito formerly with WGNHS and now a professor at Beloit College, to characterize and map the presence of sulfide minerals and their potential for surface and groundwater contamination in the Wonnewoc Formation and Tunnel City Group. They determined that these geological formations have the potential for surface and groundwater contamination associated with oxidation of naturally occurring sulfide minerals.

As a microbiologically oriented geoscientist, Roden recounted how his attempts to understand this earlier Haas and Zambito work made for humorous interchanges. “Lisa laid all this stuff out and she had all these maps. It took me a long time, but finally I got it, ‘Oh, layers within the same geological formation are oxidized is here and reduced is here…let’s study them both by way of comparison!’”

While those maps and the larger theme of this research are not going to appear on the silver screen, they do provide more than the fluff of a tub of popcorn. It’s important knowledge to share because it provides guidance about private and municipal drinking water wells in places with pyrite formations that could gain dubious fame thanks, in part, to microbial communities.

The post New paper demonstrates the role of microbes in oxidizing pyrite first appeared on WRI.

Original Article

News Release | WRI

News Release | WRI

https://www.wri.wisc.edu/news/new-paper-demonstrates-the-role-of-microbes-in-oxidizing-pyrite/

Moira Harrington

July 16, 2020

By Jennifer A. Smith

Pyrite, the mineral commonly known as fools’ gold for its luster and yellowish hue, can be found in the sandstone formations of Wisconsin, including in Trempealeau County.

Water Resources Institute-funded researchers are now examining what happens when that pyrite meets oxygen and microbes deep below the surface, particularly at circumneutral pH, a situation that has not been well understood up to this point. This intermingling could affect groundwater quality.

The research team’s two-year project (“Microbially mediated oxidation of trace element-bearing sulfide minerals in sandstones of Trempealeau County, Wisconsin”) began in summer 2019.

The team consists of University of Wisconsin-Madison professors Eric Roden and Matt Ginder-Vogel, along with geoscience graduate student Lisa Haas and Beloit College professor Jay Zambito.

Zambito was formerly with the Wisconsin Geological and Natural History Survey and, while there, worked on an earlier WRI-funded study with hydrogeologist Mike Parsen (also at the survey) that established some of the basis for the current study in terms of the presence of pyrite in two geologic units.

Haas and Roden visit a sand mine in Trempealeau County to collect freshly excavated Wonewoc sand and Tunnel City overburden for microcosm experiments. They are discussing the thin, intermittent clay sequences of the Wonewoc Formation. (Photo: Lisa Kamal)

The current study focuses on material found in the Tunnel City Group and Wonewoc Formation. While these rock units underlie much of the state, in Trempealeau County they are close to, or exposed at, the land surface and, depending on the amount of oxygen in the subsurface, have been observed to possess a notable amount of pyrite.

Roden described it: “In these sandstone formations, the pyrite is present in a state that you might call disseminated; it’s basically spread throughout the aquifer sand,” with the distributions varying in size and precise location.

What happens is that “when the pyrite in the sandstone is exposed to oxygen in groundwater, it reacts with the oxygen and that causes two things. One is that the mineral gets destroyed, if you will. It becomes oxidized,” he said. That results in a lowering of the groundwater’s pH. In turn, that increased acidity can lead to the release of toxic trace elements into the groundwater—things such as iron, arsenic, cadmium, zinc and lead—that have the potential to negatively affect groundwater quality.

The researchers believe this reaction is being sped up by the presence of microbes deep below the surface. “We’ve been working with the possibility that microbes, through their metabolism, can accelerate the reaction of oxygen with pyrite—and this is what’s crucial—at neutral pH,” said Roden.

Ginder-Vogel summarized, “It’s the microbes, water and minerals, and it’s this really interesting interface that is super dynamic and constantly changing. It’s really interesting from a broad groundwater perspective.”

The role of frac sand mining

The study bears a connection to industrial sand mining, also called frac sand mining, in this part of the state. When companies scrape off material known as “overburden”—in this instance, the Tunnel City Group rock—they set it aside in order to get to the sand (here, the Wonewoc Formation) they seek underneath. They later use the excavated overburden and low-quality sand for reclamation. However, the geologic material that was isolated in the subsurface is now disturbed and exposed to atmospheric levels of oxygen and rain at land surface. If pyrite was present in the rock, it will oxidize.

The team will examine whether this excavation and piling of materials help lead to the release of trace elements as a result of pyrite oxidation, which could have implications for the water quality of homeowners in the area. In experiments, they are working with collected samples of overburden and non-valuable geologic material and will be able to compare those with material collected from rock core of the geologic units of interest.

Haas, the graduate student, is running the lab experiments. A native of Mount Horeb, she completed her bachelor’s degree in the geoscience department in 2016 and then spent a few years with the Wisconsin Geological and Natural History Survey before beginning graduate school. As an undergraduate, she served as a research assistant to Zambito and Parsen on the earlier, related study.

For the current project, she is wrapping up the first set of experiments capturing pyrite oxidation and subsequent metal release from subsurface rock samples of the Tunnel City Group and Wonewoc Formation in unfiltered groundwater samples with the native aquifer microorganisms—the microorganisms thought to be accelerating the pyrite oxidation reaction.

Four vials contain pulverized Wonewoc Formation rock, with a natural abundance of pyrite, in groundwater. The vials with red tape are the abiotic, or killed, controls. The live microcosms (without red tape) were sterilized and then inoculated with groundwater with live aquifer microorganisms. After 213 days following the start of the experiment, enough pyrite in the live microcosms oxidized to render the groundwater acidic (pH ~4). However, minimal pyrite was oxidized in the abiotic microcosms and the solution stayed circumneutral (pH ~8.5). (Photo: Lisa Haas)

As Haas described the process, “What we did is collect groundwater with some of those native microorganisms, and I put them in a vial and monitored chemical compounds that are produced as a result of this mineral dissolving and found that, with the native microbial communities, pyrite will dissolve faster than abiotically. So microorganisms are…significant drivers to this reaction.”

The next set of experiments will investigate pyrite oxidation in Tunnel City Group overburden and unprocessed sand from the Wonewoc Formation as described previously.

A kind of universality

While this experimental, analytical study is not designed to survey impacts to groundwater or surface water in Trempealeau County, it lays a foundation for possible future work.

“Our findings have a kind of universality,” said Roden. “Microbes are everywhere. And whatever we find, I can guarantee that that would apply in other environments where the lithology and also the hydrology were similar… All the details of what happens where on the landscape are determined by geology, but the microbes and the chemistry are always there.”

Ginder-Vogel echoed that thought: “These are reactions that are occurring everywhere. [Frac sand] mining may accelerate some of the reactions, and that’s where fundamental types of science—and what Eric and I do—comes in. We can understand these reactions and start to think about what types of processes might push them one way or push them another way, and then bring in some smart hydrologists to help us model what actually happens.”

The post Research on pyrite oxidation and native microorganisms has implications for groundwater quality in western Wisconsin first appeared on WRI.

Original Article

News Release – WRI

News Release – WRI

https://www.wri.wisc.edu/news/pyrite-oxidation-in-western-wi/

Jennifer Smith